瞿昆
教师姓名：瞿昆
电子邮箱：
职务：国际合作与交流部部长
学位：博士
职称：教授
所属院系：国际合作与交流部（含港澳台办公室）、国际学院（合署办公）
学科：
其他联系方式
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论文成果
- Q. Liu#, L. Zaba#, A. Satpathy, M. Longmire, W. Zhang, K. Li, J. Granja, C. Guo, J. Lin, R. Li, K. Tolentino, G. Kania, O. Distler, D. Fiorentino, L. Chung, K. Qu*, H. Chang* “Chromatin accessibility landscapes of skin cells in systemic sclerosis nominate dendritic cells in disease pathogenesis”, Nature Communications, 2020..2021
- Q. Liu#, L. Zaba#, A. Satpathy, M. Longmire, W. Zhang, K. Li, J. Granja, C. Guo, J. Lin, R. Li, K. Tolentino, G. Kania, O. Distler, D. Fiorentino, L. Chung, K. Qu*, H. Chang* “Chromatin accessibility landscapes of skin cells in systemic sclerosis nominate dendritic cells in disease pathogenesis”, Nature Communications, 2020.
- C. Guo#, B. Li#, H. Ma, X. Wang, P. Cai, Q. Yu, Lin. Zhu, L. Jin, C. Jiang, J. Fang, Q. Liu, D. Zong, W. Zhang, Y. Lu, K. Li, X. Gao, B. Fu, L. Liu, X. Ma, J. Weng, H. Wei, T. Jin*, J. Lin*, K. Qu* “Tocilizumab treatment in severe COVID-19 patients attenuates the inflammatory storm incited by monocyte centric immune interactions revealed by single-cell analysis”, Nature Communications, 2020.
- B. Li#, Y. Li#, K. Li, L. Zhu, Q. Yu, P. Cai, J. Fang, W. Zhang, P. Du, C. Jiang, J. Lin, K. Qu*. “APEC: an accesson-based method for single-cell chromatin accessibility analysis”, Genome Biology, 2020.
- Haohuan Xie#, Wen Zhang#, Mei Zhang#*, Tasneem Akhtar, Young Li, Wenyang Yi, Xiao Sun, Zuqi Zuo, Min Wei, Xin Fang, Ziqin Yao, Kai Dong, Suijuan Zhong, Qiang Liu, Yong Shen, Qian Wu, Xiaoqun Wang, Huan Zhao, Jin Bao, Kun Qu*, Tian Xue*. “Chromatin accessibility analysis reveals regulatory dynamics of developing human retina and hiPSC-derived retinal organoids”, Science Advances, 2020
- Fang J#, Ma Q#, Chu C, Huang B, Li L, Cai P, Batista PJ, Tolentino KEM, Xu J, Li R, Du P, Qu K*, Chang HY* “Functional classification of chromatin associated lncRNAs via histone modification specific PIRCh-seq analysis”, Genome Biology, 2020
- Kun Li#, Yang Wu#, Young Li, Qiaoni Yu, Zhigang Tian, Haiming Wei*, Kun Qu*, “Landscape and dynamics of the transcriptional regulatory network during natural killer cell differentiation”, Genomics, Proteomics & Bioinformatics, 2020 (In press)
- Pengfei Cai#, Auke BC Otten#, Binbin Cheng, Mitsuhiro A. Ishii, Wen Zhang, Beibei Huang, Kun Qu*, Bryan K. Sun*, “A genome-wide long noncoding RNA CRISPRi screen identifies PRANCR as a novel regulator of epidermal homeostasis”, Genome Research, 2019
- Z. Zuo, Y. Jin, W. Zhang, Y. Lu, B. Li* & K. Qu*, “ATAC-pipe: general analysis of genome-wide chromatin accessibility”, Briefings in Bioinformatics, 2018.
- K. Qu#, L. Zaba#, et al, H. Chang “Chromatin accessibility landscape of cutaneous T cell lymphoma and dynamic response to HDAC inhibitors”, Cancer Cell, 32:27-41, 2017
- K. Qu#, S. Garamszegi#, F. Wu#, et al, J. Mesirov* “Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace”, Nature Methods, 13, 245–247, 2016.
- K. Qu#, L. Zaba#, P. Giresi, et al, H. Chang* “Individuality and dynamics of personal regulomes in human T cells”, Cell Systems, 1:51-61, 2015 (Previewed in Cell System)
- Y. Wan#, K. Qu#, Q. Zhang, R. Flynn, O. Manor, Z. Ouyang, J. Zhang, R. Spitale, M. Snyder, E. Segal* and H. Chang* “Landscape and variation of RNA secondary structure across the human transcriptome” Nature, 505:706-9, 2014 (Highlighted in Nature News & Views)
- V. Lopez-Pajares, K. Qu, et al, P. Khavari “A LncRNA-MAF/MAFB Transcription Factor Network Regulates Epidermal Differentiation”, Developmental Cell, 32(6), 693-706, 2015 (Cover Article, Previewed in Developmental Cell)
- J. Quinn, I. Ilik*, K. Qu#, P. Georgiev#, et al., H. Chang “Revealing long noncoding RNA architecture and functions using domain-specific chromatin isolation by RNA purification”, Nature Biotechnology, 32:933-940, 2014
