Softwares

1. EXPLICIT

    A package for identifying transcription factor regulators for gene modules in Arabidopsis. [GitHub] [FullText]

2. EXPLICIT-Human

    A package for identifying transcription factor regulators for gene modules in human. [GitHub] [FullText]

3. EXPLICIT-Kinase

     A package for identifying kinase regulators for gene modules and pathways. [GitHub] [FullText]

4. SingleCellGGM

     A package for conducting single-cell gene co-expression network analysis based on the graphical Gaussian model. [GitHub] [FullText]

Datasets/Networks

1. MaizeGGM: Maize gene co-expression network.

     Refer to our paper for more details. 

2. AtGGM2020: Arabidopsis gene co-expression network

     Refer to our paper for more details. 

3. RiceGGM: Rice gene co-expression network

     Refer to our paper for more details.

4. AtRootGGM: Arabidopsis root single-cell gene co-expression 

     Refer to our paper for more details.